DAWN: Diversity Among Wheat geNomes

DAWN provides access to a variety of public wheat data sets in the context of the International Wheat Genome Sequencing Consortium’s (IWGSC) RefSeq v1.0 genome assembly [1]. This is achieved by pre-processing the data and making it available through a JBrowse genome browser.

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Screenshots

Jbrowse: DAWN: Wx-B1

Coordinate converter: DAWN: Wx-B1

DAWN Source Data Sets

The following data sets are available through DAWN:

  • Reference sequence
    • IWGSC RefSeq v1.0 genome assembly [1].
  • Gene Annotations
    • IWGSC v1.0
    • IWGSC v1.1
  • Markers (as part of IWGSC v1.0 annotation)
    • DArT
    • EST
    • MAS
    • SNP platforms
    • SSR
  • Whole genome shotgun data
  • Transcriptomic data
  • Exome data

Citing DAWN

Watson-Haigh, N.S., Suchecki, R., Kalashyan, E., Garcia, M. & Baumann, U. (accpeted) DAWN: A Resource for Yielding Insights into the Diversity Among Wheat Genomes. BMC Genomics. 10.1186/s12864-018-5228-2

External Resources

You may also find the following wheat related resources udeful: